BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB022F12SP1|AL427940
(967 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1802 1870 0.0
>3x_Contig1802
Length = 45229
Score = 1870 bits (942), Expect = 0.0
Identities = 960/966 (99%), Gaps = 1/966 (0%)
Strand = Plus / Minus
Query: 3 tcaaatcaacattgcctaaatacccataaatcttcgtcaataatacattccagttgtgtg 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 33601 tcaaatcaacattgcctaaatacccataaatcttcgtcaataatacattccagttgtgtg 33542
Query: 63 aaagtgctgggacatattctcagctaaattgctgcttccaacttagtaaaccgcttaaac 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 33541 aaagtgctgggacatattctcagctaaattgctgcttccaacttagtaaaccgcttaaac 33482
Query: 123 tcgtttcatttacatcacgaggatagaaaagcaacaagcggcgatgttagtcagcgatag 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 33481 tcgtttcatttacatcacgaggatagaaaagcaacaagcggcgatgttagtcagcgatag 33422
Query: 183 ttctgttgatggaggggaaagaaggagctctttcaatgatgttgaccttgaaaacctgaa 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 33421 ttctgttgatggaggggaaagaaggagctctttcaatgatgttgaccttgaaaacctgaa 33362
Query: 243 ggaaactctagatggtcgtcatttttgtttgttccctcaaccttggaaaacgggtaaaca 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 33361 ggaaactctagatggtcgtcatttttgtttgttccctcaaccttggaaaacgggtaaaca 33302
Query: 303 gttagctttcctggtctcttgtttcttatgtttggcatttgtttacttcagatttagcaa 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 33301 gttagctttcctggtctcttgtttcttatgtttggcatttgtttacttcagatttagcaa 33242
Query: 363 cgagcaggatttgccgaacgcaaatatgccatttggcaaaagccctttagagaaaaagag 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 33241 cgagcaggatttgccgaacgcaaatatgccatttggcaaaagccctttagagaaaaagag 33182
Query: 423 tgttggaactttctttgcagctgcagggacggtcttctttggcgttatcgctaaaggggc 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 33181 tgttggaactttctttgcagctgcagggacggtcttctttggcgttatcgctaaaggggc 33122
Query: 483 attcgttgtcgctaaggcagcttgtaatccagcggctcttgctgcaatagcagcttttaa 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 33121 attcgttgtcgctaaggcagcttgtaatccagcggctcttgctgcaatagcagcttttaa 33062
Query: 543 tgttgctggtgcctcaggatgtattggagcttatgctgttggagctttatgtgcagcaat 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 33061 tgttgctggtgcctcaggatgtattggagcttatgctgttggagctttatgtgcagcaat 33002
Query: 603 ctcagcaggattagctgttgaatcgggttcacagggttggcagtggtacaaaggctctgg 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 33001 ctcagcaggattagctgttgaatcgggttcacagggttggcagtggtacaaaggctctgg 32942
Query: 663 agtcgcaaaaagagaaattgaatgcgaagtatatcactatattccgctcatcaataatac 722
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 32941 agtcgcaaaaagagaaattgaatgcgaagtatatcactatattccgctcatcaataatac 32882
Query: 723 catttttggaggttcattgcatacatctgacatatttcagagtatcaattccacagatcc 782
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 32881 catttttggaggttcattgcatacatctgacatatttcagagtatcaattccacagatcc 32822
Query: 783 gttagtcgtagmtcttttacagcatattggtgtaatttatgataatagttcaaataacat 842
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 32821 gttagtcgtagactctttacagcatattggtgtaatttatgataatagttcaaataacat 32762
Query: 843 cgatctaggtgctgactttttgaacaaaagatcacagctga-ccctttaatgtacacctg 901
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 32761 cgatctaggtgctgactttttgaacaaaagatcacagctgacccctttaatgtacacctg 32702
Query: 902 gacagcaaactacaccgggtttatgacaactacctacgtgcagccagaacacttkacttt 961
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 32701 gacagcaaactacaccgggtttatgacaactacctacgtgcagccagaacacttgacttt 32642
Query: 962 gtctgt 967
||||||
Sbjct: 32641 gtctgt 32636
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6476
Number of Sequences: 1807
Number of extensions: 6476
Number of successful extensions: 51
Number of sequences better than 1.0e-20: 1
length of query: 967
length of database: 10,358,551
effective HSP length: 16
effective length of query: 951
effective length of database: 10,329,639
effective search space: 9823486689
effective search space used: 9823486689
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)